Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941879.1_cds_XP_016485583.1_76497
CDS Infomation

[gene=LOC107805978] [db_xref=GeneID:107805978] [protein=mannan endo-1,4-beta-mannosidase 1-like] [protein_id=XP_016485583.1] [location=join(1504..1839,2147..2341,2469..2591,2684..2886,2970..3348)] [gbkey=CDS]
Sequence

ATGTCTTTTACAAGAACAATCTGTATCTCTGGGCTCTTGCTCTTGTTCCTAACTCTCGCA
TGTGAAGCTAGGGTTCCAACAAATACTAATGCAGGGTTCATAGCAGTGAATGGTGCTCAT
TTTGAACTCAATGGATCGCCCTTTTTATTCAATGGTTTCAACTCGTATTGGTTGATGCAT
GTTGCTGCTGAACCTAGTGAGAGGTACAAAGTCACTGAGGTTCTTAAAGATGCATCTGCT
GCTGGTCTTTCTGTTTGTCGCACGTGGGCTTTTAGTGATGGAGGTGACAGAGCATTGCAA
ATATCACCTGGAGTTTACGATGAACGTGTCTTTCAGGGGTTGGATTTTGTGATCTCGGAA
GCTAAGAAATATGGTGTCCGCTTAATCTTGAGCTTTGTAAACAACTGGAACGACTTCGGA
GGAAAAGCTCAATATGTTCAGTGGGCTCGAAATGCCGGAGCTCAAATTAATGGTGACGAT
GACTTTTATACTCATCCTATGCTCAAAGATTATTACAAGAACCATATTAAGAAAGTTATT
ACAAGATTCAACACCATTACTAGAGTTGCTTACAGAGATGATCCAACAATCATGGCATGG
GAACTCATTAATGAACCACGCGACCAAGCTGACTACTCTGGAAAAACTGTCAATGCTTGG
GTTCAAGAAATGGCAAGTTTTGTAAAGTCAGGAGACAAAAAACATTTGTTGGAGATAGGA
ATGGAGGGATTTTATGGTGATTCAGTTCCTGAAAGGAAGCAAGTTAATCCCGGTTATCAA
GTGGGAACAGATTTCATCAGCAACCATCTTATCAATGAGATTGATTTTGCCACTATTCAT
GCATACACTGACCAATGGGTATCAGGACAAAACGATGAAGCACAATTAGCATGGATGCAA
AGGTGGGTGACAAGCCATTGGGAAGATGCAAAAACTATACTAAAGAAACCTCTAGTTCTA
TCTGAATTTGGCAAGTCTAGCAGAGGTCAAGGATACAGCCTTAGTTCAAGAGACACATTC
ATGGGTAGTGTATATAAAAATATCTACAATTTGGCAAAAGAAGGGGGAACCATGGCAGGA
AGCTTAGTATGGCAACTAATGGCACAAGGAATGGAGAATTATGAGGATGGTTATTGTATT
GTTTTGGGACAAAACCCTTCAACTGCAGGAATAATTTCAGGTCAATCGCATGCCATGACA
GCTTTGGCTAATCTAGTTCATAACCCTTTAGAGTGA

Peptide Sequence

PEP ID

XP_016485583.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 1-like [Nicotiana tabacum]
Sequence

MSFTRTICISGLLLLFLTLACEARVPTNTNAGFIAVNGAHFELNGSPFLFNGFNSYWLMH
VAAEPSERYKVTEVLKDASAAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVISE
AKKYGVRLILSFVNNWNDFGGKAQYVQWARNAGAQINGDDDFYTHPMLKDYYKNHIKKVI
TRFNTITRVAYRDDPTIMAWELINEPRDQADYSGKTVNAWVQEMASFVKSGDKKHLLEIG
MEGFYGDSVPERKQVNPGYQVGTDFISNHLINEIDFATIHAYTDQWVSGQNDEAQLAWMQ
RWVTSHWEDAKTILKKPLVLSEFGKSSRGQGYSLSSRDTFMGSVYKNIYNLAKEGGTMAG
SLVWQLMAQGMENYEDGYCIVLGQNPSTAGIISGQSHAMTALANLVHNPLE

Transcript Sequence

Gene sequence data has not been registered.